尼罗罗非鱼、萨罗罗非鱼及其杂交子代胰岛素样生长因子(IGF-Ⅰb)基因3′cDNA末端克隆及序列分析
作者:
作者单位:

作者简介:

通讯作者:

中图分类号:

基金项目:

国家重点基础研究发展计划


Cloning and sequencing of IGF-Ⅰb 3′cDNA in Oreochromis niloticus, Sarotherodon melanotheron and their hybrid
Author:
Affiliation:

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    为探讨尼罗罗非鱼、萨罗罗非鱼及其杂交子代(Oreochromis niloticus♀× Sarotherodon melanotheron)IGF-Ⅰ基因结构差异,研究IGF-Ⅰ基因与此3种基因型罗非鱼耐盐性能差异之间的关系,通过3′RACE的方法,从鳃的总RNA分别获得其IGF-Ⅰb基因的部分cDNA序列,长度分别为1 076 bp、1 075 bp和1 079 bp,包含完整的开放阅读框(ORF)546 bp、一个终止密码及含polyA信号的3′UTR;ORF编码182个氨基酸,包括信号肽(44aa),成熟肽B区(29aa)、C区(10aa)、A区(21aa)、D区(8aa)及编码70aa 的E区,二级结构为混合类型;与其他脊椎动物IGF-Ⅰb序列的序列相似度达75.8%~100%;成熟肽A、B区高度保守,C区第82位后缺失2aa, E区第131位和159位分别缺失3aa和1aa; 萨罗罗非鱼在E133位发生Ala/Pro氨基酸残基替换,与耐盐性强的莫桑比克罗非鱼和画眉罗非鱼一致,推测IGF-Ⅰb基因E区选择性剪切与3种罗非鱼耐盐性能差异有关。

    Abstract:

    Aiming at exploring the sequence differences of IGFⅠ gene of Nile tilapia (Oreochromis niloticus NewGifts,ON), blackchin tilapia (Sarotherodon melanotheron,SM) and their First Generation of Hybrid (HB), investigating the relationships between the great differences of saltresistant property among the three genotypes, we cloned partial cDNA fragments of insulinlike growth factor Ⅰ(IGF-Ⅰ) from gill extracts through rapid amplification of 3′ cDNA ends(3′RACE)methods. The results demonstrated to be the IGF-Ⅰb gene cDNAs with length of 1 076 bp,1 075 bp and 1 079 bp respectively and comprising of a stop codon, a 546 bp open reading frame (ORF) encoding a 182 amino acid peptides(aa), and 3′untranslated regions(3′UTR). The deduced amino acid sequence of IGF-Ⅰb precursor is composed of signal peptide, mature peptide(including conserved B, C, A and D domains consisting of 29aa,10aa,21aa and 8aa respectively)and E domain of 70aa. Results of the predicted secondary structures were typed as “mixed patterns”. The results of multiple alignments showed highly homologous with 75.8% to 100% amino acid identity. The B and A domains are highly conserved in all of the allied species. There are 2aadeletion between No.82 and 83 sites in C domain, 3aa and 1aadeletion next to NO.131 and No.159 site, respectively. Ala / Pro substitution occurred at No.133 of E domain of blackchin tilapia compared with ON and HB, which is identical to Oreochromis mossambicus and Oreochromis urolepis hornorum. We presumed that the differences of saltresistant property of ON, SM and HB may be due to the alterative splicing of the IGF-Ⅰ E domain.

    参考文献
    相似文献
    引证文献
引用本文

范武江,李思发,王兵,孟庆辉.尼罗罗非鱼、萨罗罗非鱼及其杂交子代胰岛素样生长因子(IGF-Ⅰb)基因3′cDNA末端克隆及序列分析[J].水产学报,2010,34(4):489~499

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:2009-09-27
  • 最后修改日期:2009-12-22
  • 录用日期:2010-03-01
  • 在线发布日期: 2010-04-07
  • 出版日期: 2010-04-15